ReMap 2018 v1.2

An integrative ChIP-seq analysis of regulatory regions

NR2F2



DNA conservation around transcription factor binding sites (±1kb) was computed using the Genomic Evolutionary Rate Profiling (GERP) score. For each base pair, GERP scores are averaged across all binding sites (grey line), and a sliding average window of 25bp (red) and 100bp (yellow) has been applied.

Conservation scores were extracted from the Ensembl Compara database v89 using the 24 amniota vertebrates multiple alignments.

CTCF example


DNA conservation around transcription factor binding sites (±1kb) was computed using the Genomic Evolutionary Rate Profiling (GERP) score. For each base pair, GERP scores are averaged across all binding sites (grey line), and a sliding average window of 25bp (red) and 100bp (yellow) has been applied.

Conservation scores were extracted from the Ensembl Compara database v89 using the 24 amniota vertebrates multiple alignments.