ReMap 2018 v1.2

An integrative ChIP-seq analysis of regulatory regions

POU2F1

Function : POU class 2 homeobox 1
Description : The OCT1 transcription factor was among the first identified members of the POU transcription factor family (summarized by Sturm et al., 1993 [PubMed 8314572]). Members of this family contain the POU domain, a 160-amino acid region necessary for DNA binding to the octameric sequence ATGCAAAT.[supplied by OMIM, Jul 2010]

Classification  

Super Class Helix-turn-helix domains
Class Homeo domain factors
Family POU domain factors
Sub Family POU2 (Oct-1/2-like factors)

External references

Ensembl ENSG00000143190
RefSeq NP_002688
Uniprot P14859
Aliases OCT1, OTF1, oct-1B
UCSC Gene coordinates chr1:167220828-167427344

External Links

JASPAR MA0785.1
Wikipedia POU2F1
WikiGenes POU2F1
Transcription Factor Encylopedia POU2F1    
GeneCards POU2F1
FactorBook POU2F1


Genomic visualization & Analyses for MACS

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for MACS

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

MACS - Datasets retained for POU2F1

Genomic visualization & Analyses for JAMM

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for JAMM

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

JAMM - Datasets retained for POU2F1